Predictions available for 19,635 genes.
Predictions are based on gene expression profiles of 106,462 sample.
These samples represent many tissue types, disease states, cellular contexts, experimental variation and therapeutic/chemical perturbations.
|Gene set database||Number of gene sets included|
|Gene Ontology - Biological Process (MSigDB v6.2)||4203|
|Gene Ontology - Molecular Function (MSigDB v6.2)||843|
|Gene Ontology - Cellular Component (MSigDB v6.2)||528|
|REACTOME (MSigDB v6.2)||645|
|KEGG (MSigDB v6.2)||185|
|BIOCARTA (MSigDB v6.2)||210|
|Chemical and Genetic Perturbations (CGP MSigDB v6.2)||2968|
|Transcription Factor Targets (TFT MSigDB v6.2)||573|
|MicroRNA Targets (MIR MSigDB v6.2)||205|
|Hallmark Gene Sets (MSigDB v6.2)||50|
|Cancer Gene Neighborhoods (CGN MSigDB v6.2)||427|
|Cancer Modules (CM MSigDB v6.2)||427|
|Oncogenic Signatures (MSigDB v6.2)||189|
|Immunologic Signatures (MSigDB v6.2)||4872|
|Mammalian Phenotypes (MGI April 2018)||4004|
|Human Phenotype Ontology (April 2018)||3100|
More information will follow after this method has been published.
For question, contact me at firstname.lastname@example.org
Also see my website at: www.rudolffehrmann.nl